BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002E05LP1|AL424973
(1024 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1295 1781 0.0
>3x_Contig1295
Length = 7117
Score = 1781 bits (894), Expect = 0.0
Identities = 997/1024 (97%), Gaps = 9/1024 (0%)
Strand = Plus / Minus
Query: 9 tatattgcaaagtgtcacttgtgatgagatgcyttgaagattggacgtttgtgtattaaa 68
|||||| |||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 4377 tatatttcaaagtgtcactagtgatgagatgctttgaagattggacgtttgtgtattaaa 4318
Query: 69 aacggttgattatatatacatatttgtgtatacactcaaactgatgtgttatttgattct 128
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 4317 aacggttgattatatatacatatttgtgtatacactcaaa-tgatgtgttatttgattct 4259
Query: 129 caaatttaacgtagtaagtagtagcytaatgcgccagtcataaaaacagaatttattcct 188
||||||||||||||||||||||||| |||||||| ||| |||||||||||||||||||||
Sbjct: 4258 caaatttaacgtagtaagtagtagcttaatgcgctagtaataaaaacagaatttattcct 4199
Query: 189 ccyatgtcaaaagttaaccyaatttaatcgaacaaaccgaaacccatgtcatcatcggat 248
|| |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 4198 cctatgttaaaagttaacctaatttaatcgaacaaaccgaaacccatgtcatcatcggat 4139
Query: 249 tcttccttggcttcttcttccttttcttcagcagcagcctcttcggcaccggcagcagca 308
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 4138 tcttccttggcttcttcttccttttcttcagcagcagcttcttcggcaccggcagcagca 4079
Query: 309 ccaccagtagcaactggagcagcaccaccagcaccagcctcgaacttgaccaacaagtcc 368
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 4078 ccaccagtagcaactggagcagcaccaccagcaccagcttcgaacttgaccaacaagtcc 4019
Query: 369 ttgatgttttgcttagccaaagccttagcaaagatatcagcccagataccttcaactggg 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4018 ttgatgttttgcttagccaaagccttagcaaagatatcagcccagataccttcaactggg 3959
Query: 429 acgttggcagcctcagtcaaagccaacaacttttcagaagagacttcgatatcagcatca 488
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3958 acgttggcagcttcagtcaaagccaacaacttttcagaagagacttcgatatcagcatca 3899
Query: 489 gccaagatcaaagcagcgtaagacaaagcagtctcaacagacatttctaatgtaaaaytt 548
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct: 3898 gccaagatcaaagcagcgtaagacaaagcagtttcaacagacatttctaatgtaaaattt 3839
Query: 549 cctggttctggcaagtgtagagataatcagattaagctcgtcatgaagcagactatttct 608
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 3838 cctggttctggcaagtgtagagataatcagattaagctcgtaatgaagcagactatttct 3779
Query: 609 ttggtcctttgaaaataagagaaactaaataataaaacgatataagtgataagaatattt 668
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 3778 ttggtcctttgaaaataagagaaactaaataataaaacgatataagtaataagaatattt 3719
Query: 669 cataaaagaagcttcaaattgaacaaatgccatcatgtgtaaaacaaatacttttcctat 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3718 cataaaagaagcttcaaattgaacaaatgccatcatgtgtaaaacaaatacttttcctat 3659
Query: 729 cgaaatgttaaatggttactcctgtaagttttattgatatttcacatctcatcgtggaaa 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3658 cgaaatgttaaatggttactcctgtaagttttattgatatttcacatctcatcgtggaaa 3599
Query: 789 ggtgaaaaatttcaggaaaagctgcgtggtttcgtcaggcatgataattcgtgtgatgtg 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3598 ggtgaaaaatttcaggaaaagctgcgtggtttcgtcaggcatgataattcgtgtgatgtg 3539
Query: 849 atataatgtttctgcatgaaacgctggatgtacagagtcagcgtagatgtacaagggaga 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3538 atataatgtttctgcatgaaacgctggatgtacagagtcagcgtagatgtacaagggaga 3479
Query: 909 wt-cctgatattgagtcggagtgagt-cgcagatgggtgctata-tccacat-atattct 964
| ||||||||||||||||||||||| ||||||||||||||||| ||||||| |||||||
Sbjct: 3478 atccctgatattgagtcggagtgagtccgcagatgggtgctatattccacataatattct 3419
Query: 965 atgttttat-aacatatwt-tactcgcgcgc-gtgttactgatgagtgtacc-tgtatct 1020
||||||||| ||||||| | ||||||||||| |||||||||||||||||||| |||||||
Sbjct: 3418 atgttttataaacatatatatactcgcgcgcagtgttactgatgagtgtaccttgtatct 3359
Query: 1021 taag 1024
||||
Sbjct: 3358 taag 3355
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8217
Number of Sequences: 1807
Number of extensions: 8217
Number of successful extensions: 113
Number of sequences better than 1.0e-20: 1
length of query: 1024
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1008
effective length of database: 10,329,639
effective search space: 10412276112
effective search space used: 10412276112
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)